Date
|
Topic
|
Lecturer
(*=student)
|
Lecture Slides
|
1/20/04
|
Introduction molecular
biology I
|
Dan Lopresti
|
lecture_1.pdf
|
1/22/04
|
No class
|
|
|
1/27/04
|
Introduction to molecular
biology II
|
Dan Lopresti |
lecture_2.pdf
|
1/29/04
|
Basics of sequence
comparison and alignment
|
Dan Lopresti |
lecture_3.pdf
|
2/3/04
|
Advanced sequence
comparison and alignment
|
Dan Lopresti |
lecture_4.pdf
|
2/5/04
|
Block editing models and
algorithms
|
Dan Lopresti |
lecture_5.pdf
|
2/10/04
|
Database search:
BLAST, FAST, and GenBank
|
Dan Lopresti |
lecture_6.pdf |
2/12/04
|
Cross-domain string
matching
|
Dan Lopresti |
lecture_7.pdf
|
2/17/04
|
Sequence comparison &
alignment
|
Arthur Loder*
|
lecture_8.ppt |
2/19/04
|
Sequence comparison &
alignment
|
Jesse Wolfgang*
|
lecture_9.ppt |
2/24/04
|
Sequencing and sequence
assembly
|
Lan Nie*
|
lecture_10.ppt |
2/26/04
|
Sequencing and sequence
assembly |
Upmanyu Misra*
|
lecture_11.ppt |
3/2/04
|
Physical mapping of DNA
|
Shanna Terry*
|
lecture_12.ppt |
3/4/04
|
Physical mapping of DNA |
Shi Chen*
|
lecture_13.ppt |
3/9/04
|
Spring break: no
class
|
|
|
3/11/04
|
Spring break: no
class |
|
|
3/16/04
|
Phylogenetic trees
|
Benjamin Loyle*
|
lecture_14.ppt |
3/18/04
|
Phylogenetic trees |
Bulent Moller*
|
lecture_15.ppt |
3/23/04
|
Genome rearrangements
|
Kevin Gaittens*
|
lecture_16.ppt |
3/25/04
|
Genome rearrangements |
Scott Taubman*
|
lecture_17.ppt |
3/30/04
|
RNA and protein structure
prediction
|
Tom Morrisette*
|
lecture_18.ppt |
4/1/04
|
RNA and protein structure
prediction |
Dan Lopresti
|
lecture_19.pdf |
4/6/04
|
DNA microarrays
|
Patrick Schmid*
|
lecture_20.ppt |
4/8/04
|
DNA microarrays |
Stephen Hookway*
|
lecture_21.ppt |
4/13/04
|
DNA computing
|
Deepthi Bollu*
|
lecture_22.ppt |
4/15/04
|
No class |
|
|
4/20/04
|
DNA computing
|
Charles Ormsby*
|
lecture_23.ppt |
4/22/04
|
History
|
Dan Lopresti
|
lecture_24.pdf |
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